ALTHOUGH.
There are more complex cases than simple standalone
Java app debugging. You can run a ".BAT" file as an External Tool. It's how I
have to print from Eclipse under Java, since the Eclipse people refuse to build Linux printing into Eclipse itself.
If, within that ".BAT" file, you have a java app(s) that need debugging, just set up the java command line with remote debugging enabled, then have Eclipse attach as a remote debugger.
Mind you, this is the kind of nasty evil stuff
I like to do, and isn't appropriate for most situations.
