You can refer to the following resources: J2EE WebServices by Richard Monson-Haefel (RMH): all chapters + appendices E, F & G. You may want to skip reading UDDI and JAXR from here and instead just refer to MZ's notes (see below) on these topics.
Sun's Blueprint book - Designing Webservices using J2EE 1.4: whole book
Mikalai Zaikin's (MZ) WSD Notes and Quiz. See link above in Mikalai's reply.
XSLT and TrAX from Elliot Rusty Harold's (ERH) excellent book Processing XML with Java. You can find it here.
Java Webservices Tutorial (WST) for tutorial on JAXB and Security.