Dear John,
I have not played with AXIS, as far as JWSDP1.3, there is another copy of tomcat within JWSDP1.3 tailored to run SUN's webservices. It doesn't use the existing tomcat. Not only that, it also, required their own
ANT. When you do a start Tomcat using JWSDP1.3, it is a different instance. YOu may configure your original Tomcat to port 8088 and start another instance of tomcat and you may find your AXIS accessible via 8088.
Best Regards