I am executing another program (primegens.exe) file using ProcessBuiler() in my java code. this executable executes other executables (inside this) in a for loop like blastall.exe and primer3.exe depending on the side of input.
now when I run the Java code, it is hanged! if I terminate this external process manually then java code execute rest of it. interestingly the same executable primegens.exe works fine while running from MS command Prompt.